Hands On Introduction to HPC for Life Scientists

Dates: 29 November - 1 December 2017

Location: EPCC at University of Edinburgh

Lecture Slides

Unless otherwise indicated all material is Copyright © EPCC, The University of Edinburgh, and is only made available for private study.

Day 1

Day 2

Day 3

Course Chat

https://paper.dropbox.com/doc/Hands-on-Introduction-to-HPC-for-Life-Scientists-c1aKwPygz1iYViePVgNQI

The Chat page is a live collaborative online document, hosted by Dropbox, which we will use to share links, information and comments. All course participants are encouraged to contribute.

Exercise Material

Unless otherwise indicated all material is Copyright © EPCC, The University of Edinburgh, and is only made available for private study.

Practical 1: Sequence Alignment

Practical 2: Fractal

Practical 3: Molecular Dynamics

Interactive Access

If you are having to wait a long time for jobs to run, you can try following these instructions to gain direct interactive access to an ARCHER node.